Publications

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Title Investigators Year
A Wide-Field Imaging Approach for Simultaneous Super-Resolution Surface-Enhanced Raman Scattering Bioimaging and Spectroscopy. Brian Scarpitti, Zachary Schultz, Shoup DN 2022
Accounting for Neighboring Residue Hydrophobicity in Diethylpyrocarbonate Labeling Mass Spectrometry Improves Rosetta Protein Structure Prediction. Sarah Biehn, Steffen Lindert, Danielle M Picarello, Xiao Pan, Richard W Vachet 2022
Activity and Synergy of Cu-ATCUN Antimicrobial Peptides. Jenna Greve, James Cowan 2022
Adipose Tissue Myeloid-Lineage Neuroimmune Cells Express Genes Important for Neural Plasticity and Regulate Adipose Innervation Miranda Gardner, Magdalena Blaszkiewicz, Gilian Gunsch, Jake W Willows, Jesse A Sepeda, Andrew R Sas, Kristy Townsend 2022
Cadaverine Is a Switch in the Lysine Degradation Pathway in Pseudomonas aeruginosa Biofilm Identified by Untargeted Metabolomics. Abigail Leggett, Rafael Brüschweiler, Da-Wei Li, Devin Sindeldecker, Amelia Staats, Nicholas Rigel, Lei Bruschweiler-Li, Paul Stoodley 2022
Characterization of a Salmonella Transcription Factor-DNA Complex and Identification of the Inducer by Native Mass Spectrometry. Blake Szkoda, Vicki Wysocki, Venkat Gopalan, Di Capua A, Shaffer J, Behrman EJ 2022
Collective mechanical responses of cadherin-based adhesive junctions as predicted by simulations. Brandon Neel, Marcos Sotomayor, Collin R Nisler, Sanket Walujkar, Raul Araya-Secchi 2022
COLMARq: A Web Server for 2D NMR Peak Picking and Quantitative Comparative Analysis of Cohorts of Metabolomics Samples. Abigail Leggett, Rafael Brüschweiler, Da-Wei Li, Lei Bruschweiler-Li 2022
Controlling the Direction of S-Nitrosation versus Denitrosation: Reversible Cleavage and Formation of an S-N Bond within a Dicopper Center. Alina Yerbulekova, Hannah Shafaat, Tao W, Moore CE, Zhang S 2022
Determination of lentiviral titer by surface enhanced Raman scattering. Brian Scarpitti, Zachary Schultz, Morder CJ, Balss KM 2022
Differential metabolism between biofilm and suspended Pseudomonas aeruginosa cultures in bovine synovial fluid by 2D NMR-based metabolomics. Abigail Leggett, Rafael Brüschweiler, Da-Wei Li, Lei Bruschweiler-Li, Anne Sullivan, Paul Stoodley 2022
Elastic versus brittle mechanical responses predicted for dimeric cadherin complexes. Brandon Neel, Marcos Sotomayor, Collin R Nisler, Sanket Walujkar 2022
Elucidation of structure-function relationships in Methanocaldococcus jannaschii RNase P, a multi-subunit catalytic ribonucleoprotein. Hong Duc Chau Phan, Mark Foster, Vicki Wysocki, Venkat Gopalan, Norris AS, Du C, Stachowski K, Khairunisa BH, Sidharthan V, Mukhopadhyay B 2022
Generation of Proteins with Free N-Terminal Cysteine by Aminopeptidases. Jordan Hempfling, Amanda Hummon, Dehua Pei, Sekera ER, Sarkar A 2022
Genomic and transcriptomic profiling of phoenix colonies. Aubree Zimmer, Juan Alfonzo, Sindeldecker D, Dunn M, Anderson M, Stoodley P 2022
H1.0 C Terminal Domain Is Integral for Altering Transcription Factor Binding within Nucleosomes. Nathaniel Burge, Michael Poirier, Jenna Thuma, Ziyong Z Hong, Kevin B Jamison, Jennifer J Ottesen 2022
HIV-1 Nucleocapsid Protein Binds Double-Stranded DNA in Multiple Modes to Regulate Compaction and Capsid Uncoating Jonathan Kitzrow, Karin Musier-Forsyth, Helena Gien, Michael Morse, Micah J McCauley, Robert J Gorelick, Ioulia Rouzina, Mark C Williams 2022
HIV-1 Preintegration Complex Preferentially Integrates the Viral DNA into Nucleosomes Containing Trimethylated Histone 3-Lysine 36 Modification and Flanking Linker DNA. Nathaniel Burge, Michael Poirier, Nicklas Sapp, Khan Cox, Prem Prakash, Muthukumar Balasubramaniam, Santosh Thapa, Devin Christensen, Min Li, Jared Lindeberger, Mamuka Kvaratskhelia, Jui Pandhare, Robert Craigie, Chandravanu Dash 2022
Identification of a Trm732 Motif Required for 2'-O-methylation of the tRNA Anticodon Loop by Trm7. Daisy Grove, Funk HM, Sizemore HE, Wehrle K, Miller CLW, Fraley ME, Mullins AK, Guy AR, Phizicky EM, Guy MP 2022
In Vitro Imaging of Lycopene Delivery to Prostate Cancer Cells. Brian Scarpitti, Zachary Schultz, Chitchumroonchokchai C, Clinton SK 2022
It takes two to Tango: Two gates orchestrate the opening of human TRPM2 Anthony Rish, Tianmin Fu, Zhangfei Shen 2022
Manganese-dependent microRNA trimming by 3'→5' exonucleases generates 14-nucleotide or shorter tiny RNAs. Cameron Divoky, Kotaro Nakanishi, Sim G, Kehling AC, Park MS, Secor J, Zhang H, Malhotra N, Bhagdikar D, Abd El-Wahab EW 2022
Mineralocorticoid receptor antagonists and glucocorticoids differentially affect skeletal muscle inflammation and pathology in muscular dystrophy. Zachary Howard, Federica Accornero, Jill Rafael-Fortney, Chetan K Gomatam, Charles P Rabolli, Jevanna Lowe, Arden B Piepho, Shyam S Bansal 2022
Mineralocorticoid Receptor Signaling in the Inflammatory Skeletal Muscle Microenvironments of Muscular Dystrophy and Acute Injury. Zachary Howard, Jill Rafael-Fortney, Chetan K Gomatam, Arden B Piepho 2022
Myeloid mineralocorticoid receptors contribute to skeletal muscle repair in muscular dystrophy and acute muscle injury. Zachary Howard, Jill Rafael-Fortney, Neha Rastogi, Jeovanna Lowe, J Spencer Hauck, Pratham Ingale, Chetan Gomatam, Celso E Gomez-Sanchez, Elise P Gomez-Sanchez, Shyam S Bansal 2022